||Using image based High Content Screening (HCS) can provide important pieces in the puzzle towards revealing disease pathways and individualized treatments. Together with oncologists, geneticists, and bioinformaticians within SciLife lab, we are involved in one such project for Glioblastoma cancer - a poor prognosis brain cancer.
In this presentation I will describe the image analysis approaches we have taken sofar. I will also describe the challenges, opportunities, excitement and frustration encountered when dealing with very large datasets and working in a multidisciplinary project. More specifically, i will describe how we have organized the data and analyses att uppmax and the challenge of interpreting and understanding the results.