January 2016 - Present

Centre for Image Analysis and SciLifeLab, Uppsala Universitet
Uppsala, Sweden

PostDoc

Large-Scale Data Analysis for Digital Image Analysis Applications

• Developing an open-source tool which combine the analysis of gene expression with quantification of cell and tissue morphology.
• In charge of a web platform for visualisation of large slide scanner images at different resolutions.
• As an additional project, development of an image processing algorithm for nucleus and lipid droplet segmentation and feature extraction in high-content/high-throughput microscopy screening.

October 2012 - October 2015

Université Blaise Pascal
Clermont-Ferrand, France

PhD Student

Characterisation of Volcanic Emissions through Thermal Vision

• Developed an algorithm to segment and track high-speed particles recorded on thermal videos.
• Designed a novel method to segment and parameterise volcanic plumes on thermal videos.
• Developed an algorithm to detect multiple change points in 2D radiometer data.
• Worked on a new process to detect hot spots in satellite imagery.

April 2012 - September 2012

Lawrence Berkeley National Laboratory (LBNL), Berkeley, USA

Intern

Java applications development for Detection and Tracking of DNA repair centers
The aim of this project was to improve the understanding of the nucleid organisation and the spatial distribution of the DNA repair center. Due to the large amount of data involved, I translated the existing codes in Java. Then, I developed an algorithm to segment, track and register nucleid through time.

April 2011 - September 2011

Laboratoire des Sciences de l'Habitat
Lyon, France

Intern

iPhone application development for lighting design
I developed an iPhone application to model luminance maps in interior spaces: iPhotoLux. I carried out several experiments to calibrate the camera of the iPhone4. Then, I updated an application which provides daily brightness data of a position to optimise photovoltaic panels unfolding.